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Fromm, Bastian

Forsker Norges arktiske universitetsmuseum
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  • Chen, Baoqing; Dragomir, Mihnea Paul; Fabris, Linda; Bayraktar, Recep; Knutsen, Erik; Liu, Xu; Tang, Changyan; Li, Yongfeng; Shimura, Tadanobu; Ivkovic, Tina Catela; Cruz De los Santos, Mireia; Anfossi, Simone; Shimizu, Masayoshi; Shah, Maitri Y.; Ling, Hui; Shen, Peng; Multani, Asha S.; Pardini, Barbara; Burks, Jared K.; Katayama, Hiroyuki; Reineke, Lucas C.; Huo, Longfei; Syed, Muddassir; Song, Shumei; Ferracin, Manuela; Oki, Eiji; Fromm, Bastian; Ivan, Cristina; Bhuvaneshwar, Krithika; Gusev, Yuriy; Mimori, Koshi; Menter, David; Sen, Subrata; Matsuyama, Takatoshi; Uetake, Hiroyuki; Vasilescu, Catalin; Kopetz, Scott; Parker-Thornburg, Jan; Taguchi, Ayumu; Hanash, Samir M.; Girnita, Leonard; Slaby, Ondrej; Goel, Ajay; Varani, Gabriele; Gagea, Mihai; Li, Chunlai; Ajani, Jaffer A.; Calin, George A.. The long noncoding RNA CCAT2 induces chromosomal instability through BOP1-AURKB signaling. Gastroenterology 2020; Volum 159 (6). ISSN 0016-5085.s 2146 - 2162.s doi: 10.1053/j.gastro.2020.08.018.

  • Fromm, Bastian; Domanska, Diana Ewa; Høye, Eirik; Ovchinnikov, Vladimir; Kang, Wenjing; Aparicio-Puerta, Ernesto; Johansen, Morten; Flatmark, Kjersti; Mathelier, Anthony; Hovig, Eivind; Hackenberg, Michael; Friedländer, Marc R.; Peterson, Kevin J.. MirGeneDB 2.0: the metazoan microRNA complement. Nucleic Acids Research (NAR) 2019; Volum 48 (D1). ISSN 0305-1048.s D132 - D141.s doi: 10.1093/nar/gkz885.

  • Hansen, Eline P.; Fromm, Bastian; Andersen, Sidsel D.; Marcilla, Antonio; Andersen, Kasper L.; Borup, Anne; Williams, Andrew R.; Jex, Aaron R.; Gasser, Robin B.; Young, Neil D.; Hall, Ross S.; Stensballe, Allan; Ovchinnikov, Vladimir; Yan, Yan; Fredholm, Merete; Thamsborg, Stig M.; Nejsum, Peter. Exploration of extracellular vesicles from Ascaris suum provides evidence of parasite-host cross talk. Journal of Extracellular Vesicles 2019; Volum 8:1578116 (1). ISSN 2001-3078.s 1 - 14.s doi: 10.1080/20013078.2019.1578116.

  • Lund-Andersen, Christin; Nakken, Sigve; Nygård, Ståle; Fromm, Bastian; Aasheim, Lars Birger; Davidson, Ben; Julsrud, Lars; Abrahamsen, Torveig Weum; Kristensen, Annette Torgunrud; Dybdahl, Brit; Larsen, Stein Gunnar; Hovig, Eivind; Flatmark, Kjersti. Integrative genomic analysis of peritoneal malignant mesothelioma: Understanding a case with extraordinary chemotherapy response. Cold Spring Harbor Molecular Case Studies 2019; Volum 5:a003566 (2). ISSN 2373-2873.s 1 - 15.s doi: 10.1101/mcs.a003566.

  • Ugur Umu, Sinan; Langseth, Hilde; Bucher-Johannessen, Cecilie; Fromm, Bastian; Keller, Andreas; Meese, Eckart; Lauritzen, Marianne; Leithaug, Magnus; Lyle, Robert; Rounge, Trine Ballestad. A comprehensive profile of circulating RNAs in human serum. RNA Biology 2018; Volum 15 (2). ISSN 1547-6286.s 242 - 250.s doi: 10.1080/15476286.2017.1403003.

  • Tarver, James E.; Taylor, Richard S.; Puttick, Mark N.; Lloyd, Graeme T.; Pett, Walker; Fromm, Bastian; Schirrmeister, Bettina E.; Pisani, Davide; Peterson, Kevin J.; Donoghue, Philip C.J.. Well-annotated microRNAomes do not evidence pervasive miRNA loss. Genome Biology and Evolution (GBE) 2018; Volum 10 (6). ISSN 1759-6653.s 1457 - 1470.s doi: 10.1093/gbe/evy096.

  • Bråte, Jon; Neumann, Ralf Stefan; Fromm, Bastian; Haraldsen, Arthur Alexander Blørstad; Tarver, James E.; Suga, Hiroshi; Donoghue, Philip C.J.; Peterson, Kevin J.; Ruiz-Trillo, Iñaki; Grini, Paul Eivind; Shalchian-Tabrizi, Kamran. Unicellular origin of the animal microRNA machinery. (https://www.ebi.ac.uk/ena/data/view/PRJEB21207) Current Biology 2018; Volum 28 (20). ISSN 0960-9822.s 3288 - 3295.e5.s doi: 10.1016/j.cub.2018.08.018.

  • Simovski, Boris; Vodak, Daniel; Gundersen, Sveinung; Domanska, Diana Ewa; Azab, Abdulrahman; Holden, Lars; Holden, Marit; Grytten, Ivar; Rand, Knut Dagestad; Drabløs, Finn; Johansen, Morten; Mora Ortiz, Antonio Carlos; Lund-Andersen, Christin; Fromm, Bastian; Eskeland, Ragnhild; Gabrielsen, Odd Stokke; Ferkingstad, Egil; Nakken, Sigve; Bengtsen, Mads; Nederbragt, Alexander Johan; Thorarensen, Hildur Sif; Akse, Johannes Andreas; Glad, Ingrid Kristine; Hovig, Johannes Eivind; Sandve, Geir Kjetil. GSuite HyperBrowser: integrative analysis of dataset collections across the genome and epigenome. (Fulltekst: http://publications.nr.no/1503319115/GigaScience-MLHolden-2017.pdf GigaScience 2017; Volum 6 (7). ISSN 2047-217X.s 1 - 12.s doi: 10.1093/gigascience/gix032.

  • Graudenzi, Alex; Cava, Claudia; Bertoli, Gloria; Fromm, Bastian; Flatmark, Kjersti; Mauri, Giancarlo; Castiglioni, Isabella. Pathway-based classification of breast cancer subtypes. Frontiers in Bioscience 2017; Volum 22 (10). ISSN 1093-9946.s 1697 - 1712.

  • Ovchinnikov, Vladimir Y.; Mordvinov, Viatcheslav A; Fromm, Bastian. Extreme conservation of miRNA complements in opisthorchiids. Parasitology international 2017; Volum 66 (6). ISSN 1383-5769.s 773 - 776.s doi: 10.1016/j.parint.2017.09.006.

  • Fromm, Bastian; Ovchinnikov, Vladimir Y.; Høye, Eirik; Bernal, Dolores; Hackenberg, Michael; Marcilla, Antonio. On the presence and immunoregulatory functions of extracellular microRNAs in the trematode Fasciola hepatica. Parasite immunology (Print) 2017; Volum 39:e12399 (2). ISSN 0141-9838.s 1 - 9.s doi: 10.1111/pim.12399.

  • Egger, Bernhard; Bachmann, Lutz; Fromm, Bastian. Atp8 is in the ground pattern of flatworm mitochondrial genomes. (Fulltekst: https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-017-3807-2 BMC Genomics 2017; Volum 18 (414). ISSN 1471-2164.s doi: 10.1186/s12864-017-3807-2.

  • Bachmann, Lutz; Fromm, Bastian; Patella de Azambuja, Luciana; Boeger, Walter. The mitochondrial genome of the egg-laying flatworm Aglaiogyrodactylus forficulatus (Platyhelminthes: Monogenoidea). Parasites & Vectors 2016; Volum 9:285. ISSN 1756-3305.s doi: 10.1186/s13071-016-1586-2.

  • Ylla, Guillem; Fromm, Bastian; Piulachs, Maria-Dolors; Belles, Xavier. The microRNA toolkit of insects. Scientific Reports 2016; Volum 6:37736. ISSN 2045-2322.s 1 - 13.s doi: 10.1038/srep37736.

  • Ramalho-Carvalho, João; Fromm, Bastian; Henrique, Rui; Jerónimo, Carmen. Deciphering the function of non-coding RNAs in prostate cancer. Cancer Metastasis Review 2016; Volum 35 (2). ISSN 0167-7659.s 235 - 262.s doi: 10.1007/s10555-016-9628-y.

  • Flatmark, Kjersti; Høye, Erik Ulvolden; Fromm, Bastian. microRNAs as cancer biomarkers. Scandinavian Journal of Clinical and Laboratory Investigation 2016; Volum 76. ISSN 0036-5513.s S80 - S83.s doi: 10.1080/00365513.2016.1210330.

  • Haakensen, Vilde Drageset; Nygaard, Vegard; Greger, Liliana; Aure, Miriam Ragle; Fromm, Bastian; Bukholm, Ida Rashida Khan; Luders, Torben; Chin, Suet-Feung; Git, Anna; Caldas, Carlos; Kristensen, Vessela N.; Brazma, Alvis; Børresen-Dale, Anne-Lise; Hovig, Johannes Eivind; Helland, Åslaug. Subtype-specific micro-RNA expression signatures in breast cancer progression. International Journal of Cancer 2016; Volum 139 (5). ISSN 0020-7136.s 1117 - 1128.s doi: 10.1002/ijc.30142.

  • Fromm, Bastian; Billipp, Tyler; Peck, Liam E.; Johansen, Morten; Tarver, James E.; King, Benjamin L.; Newcomb, James M.; Sempere, Lorenzo F.; Flatmark, Kjersti; Hovig, Johannes Eivind; Peterson, Kevin J.. A Uniform System for the Annotation of Vertebrate microRNA Genes and the Evolution of the Human microRNAome. Annual Review of Genetics 2015; Volum 49. ISSN 0066-4197.s 213 - 242.s doi: 10.1146/annurev-genet-120213-092023.

  • Fromm, Bastian; Trelis, María; Hackenberg, Michael; Cantalapiedra, Fernando; Bernal, Dolores; Marcilla, Antonio. The revised microRNA complement of Fasciola hepatica reveals a plethora of overlooked microRNAs and evidence for enrichment of immuno-regulatory microRNAs in extracellular vesicles. International Journal of Parasitology 2015; Volum 45 (11). ISSN 0020-7519.s 697 - 702.s doi: 10.1016/j.ijpara.2015.06.002.

  • Hahn, Christoph; Fromm, Bastian; Bachmann, Lutz. Comparative genomics of flatworms (Platyhelminthes) reveals shared genomic features of ecto- and endoparastic neodermata. Genome Biology and Evolution (GBE) 2014; Volum 6 (5). ISSN 1759-6653.s 1105 - 1117.s doi: 10.1093/gbe/evu078.

  • Fromm, Bastian; Burow, Susann; Hahn, Christoph; Bachmann, Lutz. MicroRNA loci support conspecificity of Gyrodactylus salaris and G. thymalli (Platyhelminthes: Monogenea). International Journal of Parasitology 2014; Volum 44 (11). ISSN 0020-7519.s 787 - 793.s doi: 10.1016/j.ijpara.2014.05.010.

  • Fromm, Bastian; Worren, Merete Molton; Hahn, Christoph; Hovig, Johannes Eivind; Bachmann, Lutz. Substantial loss of conserved and gain of novel microRNA families in flatworms. Molecular Biology and Evolution (MBE) 2013; Volum 30 (12). ISSN 0737-4038.s 2619 - 2628.s doi: 10.1093/molbev/mst155.

  • Fromm, Bastian; Harris, Philip David; Bachmann, Lutz. MicroRNA preparations from individual monogenean Gyrodactylus salaris – a comparison of six commercially available totalRNA extraction kits. BMC Research Notes 2011; Volum 4. ISSN 1756-0500.s doi: 10.1186/1756-0500-4-217.

  • Rodriguez, Marta; Bajo-Santos, Cristina; Hessvik, Nina Pettersen; Lorenz, Susanne; Fromm, Bastian; Berge, Viktor; Sandvig, Kirsten; Line, Aija; Llorente, Alicia. Identification of non-invasive miRNAs biomarkers for prostate cancer by deep sequencing analysis of urinary exosomes. Molecular Cancer 2017; Volum 16:156. ISSN 1476-4598.s 1 - 6.s doi: 10.1186/s12943-017-0726-4.

  • Haraldsen, Arthur Alexander Blørstad; Bråte, Jon; Neumann, Ralf Stefan; Fromm, Bastian; Grini, Paul Eivind; Shalchian-Tabrizi, Kamran. Pre-metazoan origin of animal microRNAs. European Society of Evolutionary Developmental Biology 2016-07-26 - 2016-07-29 2016.

  • Fromm, Bastian; Bachmann, Jutta; Bachmann, Lutz. Tilpassninger i arvematerialet hos parasittiske flatormer. Naturen 2015; Volum 139 (2). ISSN 0028-0887.s 59 - 66.

  • Fromm, Bastian; Bachmann, Jutta; Bachmann, Lutz. Auf der Suche nach der genetischen Basis von Ekto- und Endoparasitismus der Plattwürmer. Biologie in unserer Zeit 2015; Volum 45 (5). ISSN 0045-205X.s 281 - 283.

  • Fromm, Bastian; Worren, Merete Molton; Hahn, Christoph; Hovig, Johannes Eivind; Bachmann, Lutz. Evolution of Parasitism in Flatworms Is Accompanied by Substantial Loss of Conserved microRNA Families and Increase of Novel microRNAs. SMBE 2013 2013-07-07 - 2013-07-11 2013.

  • Hahn, Christoph; Harris, Philip David; Fromm, Bastian; Bakke, Tor A.; Bachmann, Lutz. Genomic insights into the evolution of the economically important monogenean flatworm Gyrodactylus salaris. SMBE 2012 2012-06-23 - 2012-06-26 2012.

  • Fromm, Bastian; Otto, Thomas D.; Hahn, Christoph; Harris, Philip David; Bachmann, Lutz. MiRCandRef a local assembly algorithm for description of microRNAs in non-genome organisms. SMBE 2012 2012-06-23 - 2012-06-26 2012.

  • Fromm, Bastian; Bachmann, Lutz; Harris, Philip David. MicroRNA preparations from individual monogenean Gyrodactylus salaris – comparison of six commercially available “totalRNA” extraction kits. The 4th Conference of the Scandinavian-Baltic Society for Parasitology (SBSP) 2011-06-19 - 2011-06-22 2011.

  • Fromm, Bastian; Worren, Merete Molton; Harris, Philip David; Bachmann, Lutz. The miRNA complement of Gyrodactylus salaris (Platyhelminthes, Monogenea). Deep Metazoan Phylogeny 2011 2011-10-11 - 2011-10-14 2011.

  • Rodriguez, Marta; Bajo-Santos, Cristina; Hessvik, Nina Pettersen; Lorenz, Susanne; Fromm, Bastian; Berge, Viktor; Sandvig, Kirsten; Line, Aija; Llorente, Alicia. Identification of non-invasive miRNAs biomarkers for prostate cancer by deep sequencing analysis of urinary exosomes. Molecular Cancer 2017; Volum 16:156. ISSN 1476-4598.s 1 - 6.s doi: 10.1186/s12943-017-0726-4.

  • Haraldsen, Arthur Alexander Blørstad; Bråte, Jon; Neumann, Ralf Stefan; Fromm, Bastian; Grini, Paul Eivind; Shalchian-Tabrizi, Kamran. Pre-metazoan origin of animal microRNAs. European Society of Evolutionary Developmental Biology 2016-07-26 - 2016-07-29 2016.

  • Fromm, Bastian; Bachmann, Jutta; Bachmann, Lutz. Tilpassninger i arvematerialet hos parasittiske flatormer. Naturen 2015; Volum 139 (2). ISSN 0028-0887.s 59 - 66.

  • Fromm, Bastian; Bachmann, Jutta; Bachmann, Lutz. Auf der Suche nach der genetischen Basis von Ekto- und Endoparasitismus der Plattwürmer. Biologie in unserer Zeit 2015; Volum 45 (5). ISSN 0045-205X.s 281 - 283.

  • Fromm, Bastian; Worren, Merete Molton; Hahn, Christoph; Hovig, Johannes Eivind; Bachmann, Lutz. Evolution of Parasitism in Flatworms Is Accompanied by Substantial Loss of Conserved microRNA Families and Increase of Novel microRNAs. SMBE 2013 2013-07-07 - 2013-07-11 2013.

  • Hahn, Christoph; Harris, Philip David; Fromm, Bastian; Bakke, Tor A.; Bachmann, Lutz. Genomic insights into the evolution of the economically important monogenean flatworm Gyrodactylus salaris. SMBE 2012 2012-06-23 - 2012-06-26 2012.

  • Fromm, Bastian; Otto, Thomas D.; Hahn, Christoph; Harris, Philip David; Bachmann, Lutz. MiRCandRef a local assembly algorithm for description of microRNAs in non-genome organisms. SMBE 2012 2012-06-23 - 2012-06-26 2012.

  • Fromm, Bastian; Bachmann, Lutz; Harris, Philip David. MicroRNA preparations from individual monogenean Gyrodactylus salaris – comparison of six commercially available “totalRNA” extraction kits. The 4th Conference of the Scandinavian-Baltic Society for Parasitology (SBSP) 2011-06-19 - 2011-06-22 2011.

  • Fromm, Bastian; Worren, Merete Molton; Harris, Philip David; Bachmann, Lutz. The miRNA complement of Gyrodactylus salaris (Platyhelminthes, Monogenea). Deep Metazoan Phylogeny 2011 2011-10-11 - 2011-10-14 2011.

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